LAMARC v2.1.2b

Estimation of recombination rate, migration rate, effective population sizes and exponential growth rates

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Lamarc is a program for doing Likelihood Analysis with Metropolis Algorithm using Random Coalescence. Lamarc estimates effective population sizes, population exponential growth rates, a recombination rate, and past migration rates for one to n populations assuming a migration matrix model with asymmetric migration rates and different subpopulation sizes. This version can use DNA or RNA sequence data, SNPs, microsatellites, or electrophoretic data. The program can produce: estimates of recombination rate, migration rates between each population pair, population sizes (assuming constant mutation rates among loci), population exponential growth rates, profile likelihood tables, and percentiles.

Precompiled executables


LINUX (Intel) w/GTK
Mac OSX dmg universal binary
Windows (Intel)

Source code and Documentation

fetch UNIX-source goto doc fetch html-docs
The Source Read the Documentation Download the Documentation (GNU tar and gzipped)

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Mary K. Kuhner and Jon Yamato, Dept. of Genome Sciences, University of Washington, Seattle 98195-7730;

lamarc@gs.washington.edu.